A site devoted mostly to everything related to Information Technology under the sun - among other things.

Thursday, December 20, 2012

Free Simulation Tools

GFRD (Green's Function Reaction Dynamics) decomposes the many-body reaction-diffusion problem into one- and two-body problems that can be solved analytically using Green’s Function, and uses these functions to set up an event-driven algorithm.  Find it @ http://gfrd.org

MesoRD (Mesoscopic Reaction Diffusion Simulator) is a tool for stochastic simulation of reactions and diffusion. In particular, it is an implementation of the Next Subvolume Method, which is an exact method to simulate the Markov process corresponding to the reaction-diffusion master equation.  Find it @ http://mesord.sourceforge.net/

Smoldyn is a computer program for cell-scale biochemical simulations. It simulates each molecule of interest individually to capture natural stochasticity and to yield nanometer-scale spatial resolution.  Find it @ http://www.smoldyn.org/

Monday, October 22, 2012

Friday, October 12, 2012

TinyDuino and Parallella

If you are interested in embedded development and do-it-yourself projects, take a look at this recent column by Mark Gibbs (Gear-head column in Network World) @

http://www.networkworld.com/columnists/2012/100812-gearhead.html

Wednesday, October 10, 2012

The Tomorrow Project

Check out the Tomorrow Project and he anthology of Science-Fiction stories there- available as a free download:

http://uk.tomorrow-projects.com/2012/09/the-tomorrow-project-anthology-imagining-the-future-and-building-it/

Tuesday, October 2, 2012

BigHouse Simulator

BigHouse is a simulation infrastructure for data center systems to help understand issues such as performance, power management, and fault tolerance.   Freely available @ http://www.eecs.umich.edu/BigHouse/ 

The paper is @ http://web.eecs.umich.edu/~twenisch/papers/ispass12.pdf 

Saturday, September 15, 2012

Simulating Cells

This is a computer model of a bacterium which accounts for gene function and predicts unexpected emergent properties.  The paper may be found @ http://covertlab.stanford.edu/publicationpdfs/mgenitalium_whole_cell_2012_07_20.pdf

Tuesday, September 4, 2012

Tuesday, August 14, 2012

About Me

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I had been a senior software developer working for HP and GM. I am interested in intelligent and scientific computing. I am passionate about computers as enablers for human imagination. The contents of this site are not in any way, shape, or form endorsed, approved, or otherwise authorized by HP, its subsidiaries, or its officers and shareholders.

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